contamination screening parameters

Specific parameters used in the decontamination sofware, such as reference database, coverage, and kmers. Combinations of these parameters may also be used, i.e. kmer and coverage, or reference database and kmer

MIxS term

This term is part of the Minimum Information about any Sequence (MIxS) standard.

Identifier: https://w3id.org/mixs/0000073

Example
kmer

Used in packages

Level	Package	Requirement
Sample	GSC MIMAGS	optional
Sample	GSC MISAGS	optional
Sample	ENA binned metagenome	optional