vOTU classification approach
Cutoffs and approach used when clustering new UViGs in “species-level” vOTUs. Note that results from standard 95% ANI / 85% AF clustering should be provided alongside vOTUS defined from another set of thresholds, even if the latter are the ones primarily used during the analysis. This should be formatted {ANI cutoff};{AF cutoff};{clustering method} e.g. 95% ANI;85% AF; greedy incremental clustering
Identifier: fairds:votu_classification_approach
Used in packages
Section titled “Used in packages”| Level | Package | Requirement |
|---|---|---|
| Sample | GSC MIUVIGS | optional |