finishing strategy
Was the genome project intended to produce a complete or draft genome, Coverage, the fold coverage of the sequencing expressed as 2x, 3x, 18x etc, and how many contigs were produced for the genome. Mandatory for MIGS of eukaryote, bacteria and archaea.
Identifier: fairds:finishing_strategy
Used in packages
Section titled “Used in packages”| Level | Package | Requirement |
|---|---|---|
| Sample | air | optional |
| Sample | host associated | optional |
| Sample | human associated | optional |
| Sample | human gut | optional |
| Sample | human oral | optional |
| Sample | human skin | optional |
| Sample | human vaginal | optional |
| Sample | microbial mat biolfilm | optional |
| Sample | plant associated | optional |
| Sample | sediment | optional |
| Sample | soil | optional |
| Sample | wastewater sludge | optional |
| Sample | water | optional |
| Sample | miscellaneous natural or artificial environment | optional |
| Sample | ENA Micro B3 | optional |
| Sample | built environment | optional |