Sample — microbial mat biolfilm

Level: Sample   Package: microbial mat biolfilm

This package contains 109 terms.

Term	Requirement
adapters	optional
alkalinity	optional
alkyl diethers	optional
aminopeptidase activity	optional
ammonium	optional
amount or size of sample collected	optional
annotation source	optional
bacterial carbon production	optional
biomass	optional
bishomohopanol	optional
broad-scale environmental context	mandatory
bromide	optional
calcium	optional
carbon/nitrogen ratio	optional
chemical administration	optional
chimera check	optional
chloride	optional
chlorophyll	optional
diether lipids	optional
dissolved carbon dioxide	optional
dissolved hydrogen	optional
dissolved inorganic carbon	optional
dissolved organic carbon	optional
dissolved organic nitrogen	optional
dissolved oxygen	optional
encoded traits	optional
environmental medium	mandatory
estimated size	optional
experimental factor	optional
extrachromosomal elements	optional
finishing strategy	optional
geographic location (altitude)	optional
geographic location (depth)	mandatory
geographic location (elevation)	mandatory
geographic location (latitude)	mandatory
geographic location (longitude)	mandatory
geographic location (region and locality)	optional
glucosidase activity	optional
health or disease status of specific host	optional
investigation type	ignore
isolation and growth condition	optional
known pathogenicity	optional
library construction method	optional
library reads sequenced	optional
library screening strategy	optional
library size	optional
library vector	optional
local environmental context	mandatory
magnesium	optional
mean friction velocity	optional
mean peak friction velocity	optional
methane	optional
miscellaneous parameter	optional
multiplex identifiers	optional
n-alkanes	optional
nitrate	optional
nitrite	optional
nitrogen	optional
nucleic acid amplification	optional
nucleic acid extraction	optional
number of replicons	optional
observed biotic relationship	optional
organic carbon	optional
organic matter	optional
organic nitrogen	optional
organism count	optional
oxygenation status of sample	optional
particulate organic carbon	optional
pcr conditions	optional
pcr primers	optional
perturbation	optional
petroleum hydrocarbon	optional
pH	optional
phaeopigments	optional
phosphate	optional
phospholipid fatty acid	optional
ploidy	optional
potassium	optional
pressure	optional
project name	ignore
propagation	optional
redox potential	optional
reference for biomaterial	optional
relationship to oxygen	optional
relevant electronic resources	optional
relevant standard operating procedures	optional
sample collection device or method	optional
sample material processing	optional
sample storage duration	optional
sample storage location	optional
sample storage temperature	optional
sample volume or weight for DNA extraction	optional
sequence quality check	optional
sequencing method	ignore
silicate	optional
sodium	optional
source material identifiers	optional
specific host	optional
subspecific genetic lineage	optional
sulfate	optional
sulfide	optional
target gene	optional
temperature	optional
total carbon	optional
total nitrogen	optional
total organic carbon	optional
trophic level	optional
turbidity	optional
water content	optional