Sample — HoloFood Checklist
Level: Sample Package: HoloFood Checklist
This package contains 33 terms.
| Term | Requirement |
|---|---|
| adapters | recommended |
| geographic location (latitude) | optional |
| geographic location (longitude) | optional |
| geographic location (region and locality) | optional |
| host body site | mandatory |
| host breed | recommended |
| host common name | mandatory |
| host diet | recommended |
| host diet treatment | mandatory |
| host diet treatment concentration | optional |
| host disease status | recommended |
| host gutted mass | optional |
| host length | optional |
| host scientific name | recommended |
| host sex | optional |
| host storage container | optional |
| host storage container pH | optional |
| host storage container temperature | recommended |
| host subject id | mandatory |
| host taxid | mandatory |
| host total mass | recommended |
| nucleic acid extraction | optional |
| pcr primers | optional |
| project name | ignore |
| reference host genome for decontamination | mandatory |
| sample storage buffer | recommended |
| sample storage container | recommended |
| sample storage location | optional |
| sample storage temperature | recommended |
| sample volume or weight for DNA extraction | mandatory |
| sequencing method | ignore |
| trial length | recommended |
| trial timepoint | mandatory |